Learning resources were something prominent for the teacher to conduct teaching learning process. Having appropriate learning resources would improve the quality of teaching. The purpose of the study are to analyze resources used by teachers in online teaching reading comprehension and to analyze challenges faced by EFL learners in learning reading comprehension. This qualitative study conducted semi structured interview to collect the data and used content analysis to analyze the data. The participant in this research was a reading comprehension lecturer in an Islamic-Based University. The result showed that the teacher used E-book, Journal, E-dictionary, and Learning videos as resources in online teaching reading comprehension. This research found that the students’ challenges in learning reading comprehension were lack of background knowledge, vocabulary and reading comprehension technique mastery. The research implied to encourage the teacher to be used as the material for consideration in preparing teaching materials and develop their own perspective on resources teaching reading comprehension.